NORA Documentation
Introduction
Viewer
First Steps
Learning by doing is most of the times the best option. So, try out the demos on https://www....
ROI-Tool
The ROI-Tool The term Region of Interest (ROI) is used throughout the tutorial as a synonym ...
Fiber Viewer
NORA includes fiberviewer based on webGL and Babylon.js. The main features are: Supports TCK ...
Projects and Subject/Studies
Projects NORA's subject pools are called "Projects". Each user has rights to see a certain su...
Autoloaders
Marker-Tool
The Marker-Tool enables other types of labels, for instance point-labels. To open it click on t...
Navigation Tool (alignment and deformations)
NORA provides the possibility to manually align volumetric images (nifits) in a rigid (affine) an...
URL Calls and Sharedlinks
Shared links (hanging protocols) Suppose you have arranged a case in the viewer and want to send...
Data import
PACS Querier
Starting the PACS Query Tool To start the PACS query tool click on the wrench symbol in the uppe...
Manual import
Upload as dicoms Compress your dicoms into a zip-archive and upload the zip to NORA from here...
Create Project From Existing Data
Dicom import via HTTP POST
You can upload dicoms from command line via a REST API. For example, use wget/curl (linux) or ...
Processing
General
The batchtool was created out of the needs to apply common neuroimaging pipelines (like SPM, F...
Batchtool
The Batchtool Window Consider Figure 2 below: the subject/studies table on the left is used for ...
Jobs
Generic jobs There are a multitude of predefined algorithms (mostly MATLAB) in NORA; however you...
Jupyter Notebooks
For debugging the batchtool can open a job in a jupyter notebook: The jupyter notebook is open...
Fibertracking, Streamline Analysis
Some slide explaining NORA's fiber viewer Streamline Analysis thanks to Andrea dressing for t...
Segmentation (Deep Learning)
A small overview how to use Segmentation models in NORA